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Write a Usagi mapping file

writeUsagiFile.Rd

Write a Usagi mapping file to disk

Usage

writeUsagiFile(usagiTibble, pathToUsagiFile)

Arguments

usagiTibble

A tibble containing the Usagi mapping data

pathToUsagiFile

Path where the Usagi mapping file should be written

Value

None

Details

The function writes a Usagi mapping file with the following columns:

  • sourceCode (character): Source code

  • sourceName (character): Source name

  • sourceFrequency (integer): Source frequency

  • sourceAutoAssignedConceptIds (integer): Source auto-assigned concept IDs

  • matchScore (double): Match score

  • mappingStatus (character): Mapping status

  • equivalence (character): Equivalence

  • statusSetBy (character): Status set by

  • statusSetOn (double): Status set on

  • conceptId (integer): Concept ID

  • conceptName (character): Concept name

  • domainId (character): Domain ID

  • mappingType (character): Mapping type

  • comment (character): Comment

  • createdBy (character): Created by

  • createdOn (double): Created on

  • assignedReviewer (character): Assigned reviewer

  • ADD_INFO:sourceConceptId (double): Source concept ID

  • ADD_INFO:sourceConceptClass (character): Source concept class

  • ADD_INFO:sourceDomain (character): Source domain

  • ADD_INFO:sourceValidStartDate (date): Source valid start date

  • ADD_INFO:sourceValidEndDate (date): Source valid end date

  • ADD_INFO:sourceParents (character): Source parents

  • ADD_INFO:sourceParentVocabulary (character): Source parent vocabulary

  • ADD_INFO:validationMessages (character): Validation messages

  • ADD_INFO:autoUpdatingInfo (character): Auto updating info